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A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
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Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
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Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
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Peromyscus
Rat
Sheep
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Y Chromosome
Marine Mammals
Dolphin
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i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
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modEncode
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bcm-ace-plots
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ERIS
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Jelly
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A recombination hotspot responsible for two inherited peripheral neuropathies is located near a mariner transposon-like element.
ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads.
Whole-exome sequencing identifies novel homozygous mutation in NPAS2 in family with nonobstructive azoospermia.
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data.
DNAism: exploring genomic datasets on the web with Horizon Charts.
Spontaneous Spongiform Brainstem Degeneration in a Young Mouse Lemur () with Conspicuous Behavioral, Motor, Growth, and Ocular Pathologies.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase.
A weighted false discovery rate control procedure reveals alleles at FOXA2 that influence fasting glucose levels.
An entropy-based genome-wide transmission/disequilibrium test.
Deep resequencing reveals excess rare recent variants consistent with explosive population growth.
Copy number variant and runs of homozygosity detection by microarrays enabled more precise molecular diagnoses in 11,020 clinical exome cases.
The MEDLINE Retriever.
An Integrated Metabolic Atlas of Clear Cell Renal Cell Carcinoma.
Integrated genomic characterization of endometrial carcinoma.
CD163+ macrophages promote angiogenesis and vascular permeability accompanied by inflammation in atherosclerosis.
Biological characterization and next-generation genome sequencing of the unclassified Cotia virus SPAn232 (Poxviridae).
Recurrent De Novo and Biallelic Variation of ATAD3A, Encoding a Mitochondrial Membrane Protein, Results in Distinct Neurological Syndromes.
CRIPT exonic deletion and a novel missense mutation in a female with short stature, dysmorphic features, microcephaly, and pigmentary abnormalities.
The Ensembl gene annotation system.
PEHO Syndrome May Represent Phenotypic Expansion at the Severe End of the Early-Onset Encephalopathies.
Landscape of somatic retrotransposition in human cancers.
MHC genotyping from rhesus macaque exome sequences.
Fifteen new risk loci for coronary artery disease highlight arterial-wall-specific mechanisms.
Effects of TP53 mutational status on gene expression patterns across 10 human cancer types.
Genetic meta-analysis of diagnosed Alzheimer's disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing.
NMNAT1 E257K variant, associated with Leber Congenital Amaurosis (LCA9), causes a mild retinal degeneration phenotype.
Factor XIIIA Val34Leu polymorphism does not predict risk of coronary heart disease: The Atherosclerosis Risk in Communities (ARIC) Study.
Framework for microRNA variant annotation and prioritization using human population and disease datasets.
Collaborative social and medical service application.
Whole-Exome Sequencing Identifies Novel Variants for Tooth Agenesis.
Two male sibs with severe micrognathia and a missense variant in MED12.
Molecular evidence of HIV-1 transmission in a criminal case.
Genome-wide detection and characterization of positive selection in human populations.
The Matchmaker Exchange: a platform for rare disease gene discovery.
Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast.
REEP6 deficiency leads to retinal degeneration through disruption of ER homeostasis and protein trafficking.
Identification of Variant-Specific Functions of PIK3CA by Rapid Phenotyping of Rare Mutations.
Clinical genomics: from a truly personal genome viewpoint.
Brain Tumor Epidemiology - A Hub within Multidisciplinary Neuro-oncology. Report on the 15th Brain Tumor Epidemiology Consortium (BTEC) Annual Meeting, Vienna, 2014.
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.
The completion of the Mammalian Gene Collection (MGC).
Comprehensive genomic characterization of head and neck squamous cell carcinomas.
Exome sequencing reveals novel genetic loci influencing obesity-related traits in Hispanic children.
Global transcriptional disturbances underlie Cornelia de Lange syndrome and related phenotypes.
Deletion screening of the Duchenne muscular dystrophy locus via multiplex DNA amplification.
Aberrant TGF-beta production and regulation in metastatic malignancy.
It's more than stamp collecting: how genome sequencing can unify biological research.
The phenotypic spectrum of Xia-Gibbs syndrome.
Identification of likely pathogenic and known variants in TSPEAR, LAMB3, BCOR, and WNT10A in four Turkish families with tooth agenesis.
Comparing vertebrate whole-genome shotgun reads to the human genome.
Analysis of the quality and utility of random shotgun sequencing at low redundancies.
Genetic basis for in vivo daptomycin resistance in enterococci.
An integrative variant analysis suite for whole exome next-generation sequencing data.
SINE retrotransposons cause epigenetic reprogramming of adjacent gene promoters.
SeqCNV: a novel method for identification of copy number variations in targeted next-generation sequencing data.
Exon sequencing of PAX3 and T (brachyury) in cases with spina bifida.
Prepublication data sharing.
Molecular diagnostic experience of whole-exome sequencing in adult patients.
Rho Guanine Nucleotide Exchange Factor Is a Risk Gene for Intracranial Aneurysms.
Characterization of HPV and host genome interactions in primary head and neck cancers.
Mutations in ANKLE2, a ZIKA Virus Target, Disrupt an Asymmetric Cell Division Pathway in Drosophila Neuroblasts to Cause Microcephaly.
DANPOS: dynamic analysis of nucleosome position and occupancy by sequencing.
Use of wrapper algorithms coupled with a random forests classifier for variable selection in large-scale genomic association studies.
Mechanisms for the Generation of Two Quadruplications Associated with Split-Hand Malformation.
A BAC-based physical map of the major autosomes of Drosophila melanogaster.
Genetic Mechanisms of Immune Evasion in Colorectal Cancer.
Absence of an interaction between the angiotensin-converting enzyme insertion-deletion polymorphism and pravastatin on cardiovascular disease in high-risk hypertensive patients: the Genetics of Hypertension-Associated Treatment (GenHAT) study.
dbNSFP v3.0: A One-Stop Database of Functional Predictions and Annotations for Human Nonsynonymous and Splice-Site SNVs.
Detection of single DNA base differences by competitive oligonucleotide priming.
New technique for lacrimal system intubation.
Whole-exome sequencing identifies ALMS1, IQCB1, CNGA3, and MYO7A mutations in patients with Leber congenital amaurosis.
The somatic genomic landscape of chromophobe renal cell carcinoma.
Prospective chromosome analysis of 3429 amniocentesis samples in China using copy number variation sequencing.
Cohort Profile: The Right Drug, Right Dose, Right Time: Using Genomic Data to Individualize Treatment Protocol (RIGHT Protocol).
Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome.
Initial testing (stage 1) of the PARP inhibitor BMN 673 by the pediatric preclinical testing program: PALB2 mutation predicts exceptional in vivo response to BMN 673.
Rare and low-frequency variants and their association with plasma levels of fibrinogen, FVII, FVIII, and vWF.
Obtaining informed consent for clinical tumor and germline exome sequencing of newly diagnosed childhood cancer patients.
Genomic analysis of hepatoblastoma identifies distinct molecular and prognostic subgroups.
Germline mutations in ABL1 cause an autosomal dominant syndrome characterized by congenital heart defects and skeletal malformations.
Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines.
Identification of mutations leading to the Lesch-Nyhan syndrome by automated direct DNA sequencing of in vitro amplified cDNA.
Dnmt3a loss predisposes murine hematopoietic stem cells to malignant transformation.
Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2.
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.
Quantitation of mixed-base populations of HIV-1 variants by automated DNA sequencing with BODIPY dye-labeled primers.
Predictive Value of Antiviral Effects in the Development of Hepatocellular Carcinoma in the General Korean Population with Chronic Hepatitis B.
Genetic overlap between diagnostic subtypes of ischemic stroke.
Androgen receptor promotes tamoxifen agonist activity by activation of EGFR in ERα-positive breast cancer.
A genomewide linkage scan for quantitative trait loci influencing the craniofacial complex in baboons (Papio hamadryas spp.).
Sequence variation in telomerase reverse transcriptase (TERT) as a determinant of risk of cardiovascular disease: the Atherosclerosis Risk in Communities (ARIC) study.
DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Evolution tunes the excitability of individual neurons.
Mutations in SPATA7 cause Leber congenital amaurosis and juvenile retinitis pigmentosa.
Analysis of the Par2 modifier of pulmonary adenoma formation in mice.
The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities.
Renal cell carcinoma harboring somatic TSC2 mutations in a child with methylmalonic acidemia.
Author Correction: A proteomic landscape of diffuse-type gastric cancer.
Automated DNA sequencing methods for detection and analysis of mutations: applications to the Lesch-Nyhan syndrome.
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Home
About Us
People
Funding
News
Contact Us
Visiting HGSC
Careers
Postdoctoral Associate- Genomics
Projects
Clinical Lab
eMERGE
HeartCare
KidsCanSeq Study
RIGHT10K Study
TMC-CZI Project
Cancer Genomics
The Cancer Genome Atlas Project (TCGA)
Intracranial germ cell tumors
Pancreaticobiliary and duodenal tumors
Polycythemia vera
Human Genomics
Charcot-Marie-Tooth Project
CHARGE Consortium
eMERGE
Genomic Variation
Genomics and Space Medicine (Space Omics)
GREGoR
Human Genome Project
Ion Channel Project
SNP Discovery
Somatic Mosaicism Across Human Tissues (SMaHT)
Trans-Omics for Precision Medicine (TopMed)
Microbial Genomics
Microbial Projects
A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
Microbiome Data Release Policy
Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
Rhesus monkey
Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
Kangaroo Rat
Megabat
Mouse
Peromyscus
Rat
Sheep
Wallaby
Y Chromosome
Marine Mammals
Dolphin
Killer whale
Reptiles
Adder
Arthropods
i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
Water strider
Western black widow spider
Western flower thrips
Aphid
Bees
Bumble Bee
Dwarf Honey Bee
Honey Bee
Drosophila
D. melanogaster
D. pseudoobscura
Library Construction
DGRP
DGRP Lines
modEncode
Black Fly
Butterfly
Centipede
Hessian Fly
Mite
Parasitic Wasp
Red flour beetle
Sand Fly
Tobacco Hornworm
Other Invertebrates
Acorn Worm
Cuttlefish
Sea Urchin
Publications
Software
Atlas2
ATLAS GapFill
Atlas-Link
Atlas Whole Genome Assembly Suite
Bang
bcm-ace-plots
Cassandra
CBT++
CoCa
DRAGEN
ERIS
ExCID Report
Honey
Jelly
MegaDot
Mercury
Parliament2
Princess
SimPed
Sniffles2
SNP Tools
SVCollector
SVhound
xAtlas
Resources
FTP Site
FTP Site Help
Conditions of use
HGSC Intranet
Glossary