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Human Genome Sequencing Center
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Human Genome Sequencing Center - Faculty-General/Basic (Instructor)
Human Genome Sequencing Center - Informatics-Nex Gen (Associate Professor)
Postdoctoral Associate- Genomics
Postdoctoral Associate- Statistical Genetics Division: Human Genome Sequencing Center
Research Technician III
Projects
Clinical Lab
eMERGE
HeartCare
KidsCanSeq Study
RIGHT10K Study
TMC-CZI Project
Cancer Genomics
The Cancer Genome Atlas Project (TCGA)
Intracranial germ cell tumors
Pancreaticobiliary and duodenal tumors
Polycythemia vera
Human Genomics
Charcot-Marie-Tooth Project
CHARGE Consortium
eMERGE
Genomic Variation
Genomics and Space Medicine (Space Omics)
GREGoR
Human Genome Project
Ion Channel Project
SNP Discovery
Somatic Mosaicism Across Human Tissues (SMaHT)
Trans-Omics for Precision Medicine (TopMed)
Microbial Genomics
Microbial Projects
A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
Microbiome Data Release Policy
Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
Rhesus monkey
Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
Kangaroo Rat
Megabat
Mouse
Peromyscus
Rat
Sheep
Wallaby
Y Chromosome
Marine Mammals
Dolphin
Killer whale
Reptiles
Adder
Arthropods
i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
Water strider
Western black widow spider
Western flower thrips
Aphid
Bees
Bumble Bee
Dwarf Honey Bee
Honey Bee
Drosophila
D. melanogaster
D. pseudoobscura
Library Construction
DGRP
DGRP Lines
modEncode
Black Fly
Butterfly
Centipede
Hessian Fly
Mite
Parasitic Wasp
Red flour beetle
Sand Fly
Tobacco Hornworm
Other Invertebrates
Acorn Worm
Cuttlefish
Sea Urchin
Publications
Software
Atlas2
ATLAS GapFill
Atlas-Link
Atlas Whole Genome Assembly Suite
Bang
bcm-ace-plots
Cassandra
CBT++
CoCa
DRAGEN
ERIS
ExCID Report
Honey
Jelly
MegaDot
Mercury
Parliament2
Princess
SimPed
Sniffles2
SNP Tools
SVCollector
SVhound
xAtlas
Resources
FTP Site
FTP Site Help
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Popular Content
Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome.
Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies.
Heterozygous de novo and inherited mutations in the smooth muscle actin (ACTG2) gene underlie megacystis-microcolon-intestinal hypoperistalsis syndrome.
NR2F1 mutations cause optic atrophy with intellectual disability.
Whole-exome sequencing links TMCO1 defect syndrome with cerebro-facio-thoracic dysplasia.
The weed paves the way.
BEAUTY-X: enhanced BLAST searches for DNA queries.
OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica.
Spontaneous hyperactivity in Ash1l mutant mice, a new model for Tourette syndrome.
MLH1-silenced and non-silenced subgroups of hypermutated colorectal carcinomas have distinct mutational landscapes.
Levodopa-responsive aromatic L-amino acid decarboxylase deficiency.
Adaptor-based uracil DNA glycosylase cloning simplifies shotgun library construction for large-scale sequencing.
Advances in genome biology and technology.
Naturally Occurring and Experimentally Induced Rhesus Macaque Models for Polycystic Ovary Syndrome: Translational Gateways to Clinical Application.
Analysis of microsatellite variation in Drosophila melanogaster with population-scale genome sequencing.
Somatic sequence variation at the Friedreich ataxia locus includes complete contraction of the expanded GAA triplet repeat, significant length variation in serially passaged lymphoblasts and enhanced mutagenesis in the flanking sequence.
Personalized copy number and segmental duplication maps using next-generation sequencing.
Serotonin transporter binding and genotype in the nonhuman primate brain using [C-11]DASB PET.
Human CLP1 mutations alter tRNA biogenesis, affecting both peripheral and central nervous system function.
The importance of context to the genetic architecture of diabetes-related traits is revealed in a genome-wide scan of a LG/J × SM/J murine model.
TM4SF20 ancestral deletion and susceptibility to a pediatric disorder of early language delay and cerebral white matter hyperintensities.
Molecular Correlates of Metastasis by Systematic Pan-Cancer Analysis Across The Cancer Genome Atlas.
Haplotypes at ATM identify coding-sequence variation and indicate a region of extensive linkage disequilibrium.
A simple protocol for the automation of DNA cycle sequencing reactions and polymerase chain reactions.
TWIST represses estrogen receptor-alpha expression by recruiting the NuRD protein complex in breast cancer cells.
Genetic architecture of adiposity and organ weight using combined generation QTL analysis.
PTPN11 mutations in Noonan syndrome type I: detection of recurrent mutations in exons 3 and 13.
A genomic approach to therapeutic target validation identifies a glucose-lowering GLP1R variant protective for coronary heart disease.
MTA2 is a metastasis promoter in breast cancer cells.
DVL1 frameshift mutations clustering in the penultimate exon cause autosomal-dominant Robinow syndrome.
Next generation sequencing-based molecular diagnosis of retinitis pigmentosa: identification of a novel genotype-phenotype correlation and clinical refinements.
Basic principles and technologies for deciphering the genetic map of cancer.
A common allele in RPGRIP1L is a modifier of retinal degeneration in ciliopathies.
Mapping a locus for familial thoracic aortic aneurysms and dissections (TAAD2) to 3p24-25.
Whole-Organ Genomic Characterization of Mucosal Field Effects Initiating Bladder Carcinogenesis.
NGS-based Molecular diagnosis of 105 eyeGENE(®) probands with Retinitis Pigmentosa.
Metastasis tumor-associated protein 2 enhances metastatic behavior and is associated with poor outcomes in estrogen receptor-negative breast cancer.
Use of Exome Sequencing for Infants in Intensive Care Units: Ascertainment of Severe Single-Gene Disorders and Effect on Medical Management.
Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes.
Multiplex DNA deletion detection and exon sequencing of the hypoxanthine phosphoribosyltransferase gene in Lesch-Nyhan families.
Genetic mapping and DNA sequence-based analysis of deleted regions on chromosome 16 involved in progression of bladder cancer from occult preneoplastic conditions to invasive disease.
Beta 2 adrenergic receptor 5' haplotypes influence promoter activity.
Software for automated analysis of DNA fingerprinting gels.
Mutations in smooth muscle alpha-actin (ACTA2) lead to thoracic aortic aneurysms and dissections.
Cloning and characterization of the region III flagellar operons of the four Shigella subgroups: genetic defects that cause loss of flagella of Shigella boydii and Shigella sonnei.
Critical Role of Cytosolic DNA and Its Sensing Adaptor STING in Aortic Degeneration, Dissection, and Rupture.
Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas.
Combined sequence-based and genetic mapping analysis of complex traits in outbred rats.
Adverse outcomes in clear cell renal cell carcinoma with mutations of 3p21 epigenetic regulators BAP1 and SETD2: a report by MSKCC and the KIRC TCGA research network.
Large conserved domains of low DNA methylation maintained by Dnmt3a.
Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay.
A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases.
Simian T-lymphotropic virus type 1 (STLV-1) infection in wild yellow baboons (Papio hamadryas cynocephalus) from Mikumi National Park, Tanzania.
A "double adaptor" method for improved shotgun library construction.
Replicative mechanisms for CNV formation are error prone.
Identifying gene disruptions in novel balanced de novo constitutional translocations in childhood cancer patients by whole-genome sequencing.
IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration.
Union makes strength: a worldwide collaborative genetic and clinical study to provide a comprehensive survey of RD3 mutations and delineate the associated phenotype.
Leveraging splice-affecting variant predictors and a minigene validation system to identify Mendelian disease-causing variants among exon-captured variants of uncertain significance.
Lipoprotein associated phospholipase A2 activity, apolipoprotein C3 loss-of-function variants and cardiovascular disease: The Atherosclerosis Risk In Communities Study.
Homozygous loss-of-function mutations in SOHLH1 in patients with nonsyndromic hypergonadotropic hypogonadism.
An allylic/acyclic adenosine nucleoside triphosphate for termination of DNA synthesis by DNA template-dependent polymerases.
xAtlas
Analysis of viral cis elements conferring Kaposi's sarcoma-associated herpesvirus episome partitioning and maintenance.
Novel genetic causes for cerebral visual impairment.
Virulence effect of Enterococcus faecalis protease genes and the quorum-sensing locus fsr in Caenorhabditis elegans and mice.
is mutated in a distinct type of Usher syndrome.
Complete sequence of a 38.4-kb human cosmid insert containing the polymorphic marker DXS455 from Xq28.
A SNP discovery method to assess variant allele probability from next-generation resequencing data.
Structure-activity analysis of human ghrelin O-acyltransferase reveals chemical determinants of ghrelin selectivity and acyl group recognition.
A clone-array pooled shotgun strategy for sequencing large genomes.
dbNSFP v2.0: a database of human non-synonymous SNVs and their functional predictions and annotations.
PDX-1 acts as a potential molecular target for treatment of human pancreatic cancer.
ARBoR: an identity and security solution for clinical reporting.
Integrating the UMLS into VNS Retriever.
Lactobacillus reuteri strain combination in Helicobacter pylori infection: a randomized, double-blind, placebo-controlled study.
Characterizing linkage disequilibrium and evaluating imputation power of human genomic insertion-deletion polymorphisms.
A drosophila genetic resource of mutants to study mechanisms underlying human genetic diseases.
Activating MAPK1 (ERK2) mutation in an aggressive case of disseminated juvenile xanthogranuloma.
Characterizing the cancer genome in lung adenocarcinoma.
Whole exome sequencing identifies three novel mutations in ANTXR1 in families with GAPO syndrome.
CFFM4: a new member of the CD20/FcepsilonRIbeta family.
Gene-wide analysis detects two new susceptibility genes for Alzheimer's disease.
Disruptive TP53 mutation is associated with aggressive disease characteristics in an orthotopic murine model of oral tongue cancer.
Atlas2 Cloud: a framework for personal genome analysis in the cloud.
Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens".
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach.
Bi-allelic Variants in TONSL Cause SPONASTRIME Dysplasia and a Spectrum of Skeletal Dysplasia Phenotypes.
The SWI/SNF Protein PBRM1 Restrains VHL-Loss-Driven Clear Cell Renal Cell Carcinoma.
DVL3 Alleles Resulting in a -1 Frameshift of the Last Exon Mediate Autosomal-Dominant Robinow Syndrome.
Whole-exome sequencing identifies homozygous GPR161 mutation in a family with pituitary stalk interruption syndrome.
Mutations in NGLY1 cause an inherited disorder of the endoplasmic reticulum-associated degradation pathway.
Genotype-by-diet effects on co-variation in Lp-PLA2 activity and LDL-cholesterol concentration in baboons fed an atherogenic diet.
PLD3 variants in population studies.
Evidence that multiple genetic variants of MC4R play a functional role in the regulation of energy expenditure and appetite in Hispanic children.
A visual and curatorial approach to clinical variant prioritization and disease gene discovery in genome-wide diagnostics.
ARMC4 mutations cause primary ciliary dyskinesia with randomization of left/right body asymmetry.
Multi-ethnic genome-wide association study for atrial fibrillation.
MYH11 mutations result in a distinct vascular pathology driven by insulin-like growth factor 1 and angiotensin II.
Mutations in PURA cause profound neonatal hypotonia, seizures, and encephalopathy in 5q31.3 microdeletion syndrome.
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Home
About Us
People
Funding
News
Contact Us
Visiting HGSC
Careers
Human Genome Sequencing Center - Faculty-General/Basic (Instructor)
Human Genome Sequencing Center - Informatics-Nex Gen (Associate Professor)
Postdoctoral Associate- Genomics
Postdoctoral Associate- Statistical Genetics Division: Human Genome Sequencing Center
Research Technician III
Projects
Clinical Lab
eMERGE
HeartCare
KidsCanSeq Study
RIGHT10K Study
TMC-CZI Project
Cancer Genomics
The Cancer Genome Atlas Project (TCGA)
Intracranial germ cell tumors
Pancreaticobiliary and duodenal tumors
Polycythemia vera
Human Genomics
Charcot-Marie-Tooth Project
CHARGE Consortium
eMERGE
Genomic Variation
Genomics and Space Medicine (Space Omics)
GREGoR
Human Genome Project
Ion Channel Project
SNP Discovery
Somatic Mosaicism Across Human Tissues (SMaHT)
Trans-Omics for Precision Medicine (TopMed)
Microbial Genomics
Microbial Projects
A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
Microbiome Data Release Policy
Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
Rhesus monkey
Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
Kangaroo Rat
Megabat
Mouse
Peromyscus
Rat
Sheep
Wallaby
Y Chromosome
Marine Mammals
Dolphin
Killer whale
Reptiles
Adder
Arthropods
i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
Water strider
Western black widow spider
Western flower thrips
Aphid
Bees
Bumble Bee
Dwarf Honey Bee
Honey Bee
Drosophila
D. melanogaster
D. pseudoobscura
Library Construction
DGRP
DGRP Lines
modEncode
Black Fly
Butterfly
Centipede
Hessian Fly
Mite
Parasitic Wasp
Red flour beetle
Sand Fly
Tobacco Hornworm
Other Invertebrates
Acorn Worm
Cuttlefish
Sea Urchin
Publications
Software
Atlas2
ATLAS GapFill
Atlas-Link
Atlas Whole Genome Assembly Suite
Bang
bcm-ace-plots
Cassandra
CBT++
CoCa
DRAGEN
ERIS
ExCID Report
Honey
Jelly
MegaDot
Mercury
Parliament2
Princess
SimPed
Sniffles2
SNP Tools
SVCollector
SVhound
xAtlas
Resources
FTP Site
FTP Site Help
Conditions of use
HGSC Intranet
Glossary