Whole-exome sequencing of polycythemia vera revealed novel driver genes and somatic mutation shared by T cells and granulocytes.

TitleWhole-exome sequencing of polycythemia vera revealed novel driver genes and somatic mutation shared by T cells and granulocytes.
Publication TypeJournal Article
Year of Publication2014
AuthorsWang, L, Swierczek, SI, Drummond, J, Hickman, K, Kim, SJ, Walker, K, Doddapaneni, H, Muzny, DM, Gibbs, RA, Wheeler, DA, Prchal, JT
JournalLeukemia
Volume28
Issue4
Pagination935-8
Date Published2014 Apr
ISSN1476-5551
KeywordsDNA (Cytosine-5-)-Methyltransferases, DNA Methyltransferase 3A, Exome, Granulocytes, Humans, Janus Kinase 2, Mutation, Polycythemia Vera, Repressor Proteins, Sequence Analysis, DNA, T-Lymphocytes
Abstract

To better understand the underlying molecular basis of polycythemia vera (PV), we performed whole-exome sequencing and DNA copy-number analysis of 31 -positive patients and further investigated the evolution of somatic mutations using longitudinal samples. In addition to and 9pUPD, we identified frequent recurrent somatic mutation in , and . Forty two percent of patients had a somatic mutation in at least one epigenetic modifier gene. In 4 of 31 patients, variant allele abundance suggested mutation of was preceded by other somatic mutations including , and . Strikingly, in 7 patients, apparent germline variants were detected at COSMIC codons in one or more PV-related genes in which we had also discovered somatic mutations across the cohort, suggesting that some pre- mutations contribute to substantial T-lymphocyte progeny. This study contributes to novel understanding of the complexity of PV pathogenesis.

DOI10.1038/leu.2014.7
Alternate JournalLeukemia
PubMed ID24413320
PubMed Central IDPMC4532385
Grant ListP01 CA108671 / CA / NCI NIH HHS / United States
U54 HG003273 / HG / NHGRI NIH HHS / United States
P01CA108671 / CA / NCI NIH HHS / United States
5U54HG003273 / HG / NHGRI NIH HHS / United States

Similar Publications