Portals for Exploring Noncoding Variants in Pediatric Cancer.

TitlePortals for Exploring Noncoding Variants in Pediatric Cancer.
Publication TypeJournal Article
Year of Publication2021
AuthorsCreighton, CJ
JournalTrends Genet
Volume37
Issue4
Pagination297-298
Date Published2021 Apr
ISSN0168-9525
KeywordsDatabases, Genetic, Epigenome, Exome Sequencing, Genome, Human, Genomics, Humans, Internet, Mutation, Neoplasms, Pediatrics, Polymorphism, Single Nucleotide, RNA, Untranslated, Transcriptome
Abstract

Zhou et al. present GenomePaint, a dynamic web-based data portal for exploring noncoding somatic alterations in cancer by genomic location. Multiple omics platforms - including whole-genome, whole-exome, transcriptome, and epigenome - can be visualized together. The portal incorporates data from >3800 pediatric tumors, and users may upload their own data.
DOI10.1016/j.tig.2021.01.003
Alternate JournalTrends Genet
PubMed ID33494957

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